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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914296.1_cds_XP_016464319.1_57367
CDS Infomation

[gene=LOC107787282] [db_xref=GeneID:107787282] [protein=pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like] [protein_id=XP_016464319.1] [location=complement(join(11689..12882,13622..13936))] [gbkey=CDS]
Sequence

ATGTTGGGGAGCTCAAACCAGTGTTCAGTAGCACTACAGGCCCCAAAGCCAATAAACTCA
ATGAACTACGCAACCTTGAATCGATCAATTTCTTACAATCTTCTGCGTAGGGCTTTCCCA
TTCCGCGCATATTGCACTGTCTATTCCTCAAAGCGTAATAATTTATTTTCCAGAATTAGC
CCTGTTAGACGCGCGGATCTCATAATTCCAGTTCTGGATCAATGGGTGGTCGAGGGCAGA
AAGGTCACAAGTTTGGAGCTTCAGCGCATTGTTCGTGATCTCCGTAGCCGTAAGCGTTTT
TCCCAAGCCCTACAGGTTTCCGAGTGGATGAGTGTTAGTGGTCTCTGCCCTTTCAAGTCA
GGAGATTGTGCTGTGCATTTGGATCTTATTGGTGTCGTCCATGGTTGGGAAGCGGCAGAG
TGCTACTTTAATAACCTAACAGATGAACAGAAGAATGATAAGACTTATGGTGCACTCTTC
AACTGTTATATTAGAGAATGTCTAGTTGAGAAATCCCTAGCCCATTTTCAGAAAATGAAG
AAACTTGGTTATGCTTCCTGCACTCTTGTTTACAACAATCTCATGTGCCTTTACAGAAGT
ACAAGGCAACTCGAGCGAGTCTCTGATGTGCTGTCGGAGATGAAGGAGAATGGTGTCACC
CCTAATAACTTCAGCTATCGGATCTGCATCAATTGCTGTGGAGAAAGAGCTGATTTTAGT
GGTATGGAGAAGCTTCTTGAAGAAATGGAAAGCCAGCCTTTCATATCAGTGGACTGGATC
ACCTATTCCATGATGGCTAATGTTTATATAAAAGCCAAGTTCAAGGAGAAGGCTCTTGCT
TTCTTGAAAAAGTTAGAAGATAAGCTACATAAAGATCCAATAGGTTACAATCATTTGATC
TCCCACTATGCGAATCTAGGCAATAAGGAAGAGATGTTGAGATTGTGGGGTGTACAAAAG
ATTGTGTGTAAAAAGCAAATTAACAGGGACTACATCACCATGCTAGGTTCCTTGGTTAAG
CTTGGTGATCTAGAGACAGCTGAGGCCGTGCTAAAAGAGTGGGAGTCTTCTAATCACACT
TACGATTTTAGAGTGCCAAATGTCCTTCTAATTGGATATTGCCAGAATGACTTAGTTGAT
AAAGCCGAAATAATGCTGCAAGACATTATCAAGAAAGGTAAGACACCAATCCCGAATAGT
TGGGCTATCATCGCTGCAGGGTACTTGAATTCGGATGAGATGGAAAAGGCCTTTGAATGC
ATGAAAGAAGCAATAGCAGTACGAGCACAAAATCCAGGATGGAGACCAAAACCCCATCTG
GTATCAAGCGTAAGCAAATGGCTCGGTGACCAACAAGACACTAGAGAACAAGAGGCTTTC
CTTAGCTCATTAAAGACTGTAGTTACTGGAAATAAAGATGTGCATGATACCCTTGGAAAC
ACAGAAGCCAGTGGAATAGGAGAAGAGAATGAAATTGAAGAAATTGTAAGCTATGAACAT
AGCAAGTAA

Peptide Sequence

PEP ID

XP_016464319.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Nicotiana tabacum]
Sequence

MLGSSNQCSVALQAPKPINSMNYATLNRSISYNLLRRAFPFRAYCTVYSSKRNNLFSRIS
PVRRADLIIPVLDQWVVEGRKVTSLELQRIVRDLRSRKRFSQALQVSEWMSVSGLCPFKS
GDCAVHLDLIGVVHGWEAAECYFNNLTDEQKNDKTYGALFNCYIRECLVEKSLAHFQKMK
KLGYASCTLVYNNLMCLYRSTRQLERVSDVLSEMKENGVTPNNFSYRICINCCGERADFS
GMEKLLEEMESQPFISVDWITYSMMANVYIKAKFKEKALAFLKKLEDKLHKDPIGYNHLI
SHYANLGNKEEMLRLWGVQKIVCKKQINRDYITMLGSLVKLGDLETAEAVLKEWESSNHT
YDFRVPNVLLIGYCQNDLVDKAEIMLQDIIKKGKTPIPNSWAIIAAGYLNSDEMEKAFEC
MKEAIAVRAQNPGWRPKPHLVSSVSKWLGDQQDTREQEAFLSSLKTVVTGNKDVHDTLGN
TEASGIGEENEIEEIVSYEHSK

Transcript Sequence

Gene sequence data has not been registered.